NFYA
Gene Accession number Functional annotation Reference Controlling trait P-value Haplotype 688Coincidence Sequence
NFYA Glyma.02G303800 a domain of the nuclear transcription factor Y Lu et al. 2016 Yield (seed size/weight) 0.00032 freq hap Chr02__47899986 yeild 　 　 FAM CAACAAGAGGATGAGGATAAAGGAAC
362 Hap1 C HIGH 266/318 83.33% HEX CAACAAGAGGATGAGGATAAAGGAAT
188 Hap2 T LOW 117/171 68% R CACTTTCACTGTTATTATCGTCAATTTGTC
sample_name Chr02__47899986 sample_name FAM sample_name Chr02__47899986 sample_name HEX
369 C 369 C:C 401 T JL001 T:T
390 C 405 C:C 411 T JL002 T:T
405 C C10 C:C 438 T JL008 T:T
432 C C2 C:C A3 T JL012 T:T
458 C C38 C:C B4 T JL013 T:T
C10 C C4 C:C C1124 T JL015 T:T
C1137 C C42 C:C C15 T JL017 T:T
C2 C C6 C:C C22 T JL021 T:T
C38 C C8 C:C C25 T JL027 T:T
C4 C C881 C:C C26 T JL028 T:T
C42 C CX101 C:C C32 T JL031 T:T
C43 C CX103 C:C C36 T JL033 T:T
C6 C CX104 C:C C40 T JL034 T:T
C8 C CX105 C:C C7 T JL051 T:T
C881 C CX106 C:C C884 T JL053 T:T
CX101 C CX110 C:C C9 T JL058 T:T
CX103 C CX113 C:C CX1 T JL064 T:T
CX104 C CX115 C:C CX127 T JL068 T:T
CX105 C CX119 C:C CX13 T JL079 T:T
CX106 C CX12 C:C CX134 T JL086 T:T
CX108 C CX123 C:C CX137 T JL083 T:T
CX110 C CX124 C:C CX139 T JL090 T:T
CX113 C CX130 C:C CX143 T JL092 T:T
CX115 C CX131 C:C CX145 T JL097 T:T
CX119 C CX132 C:C CX148 T JL100 T:T
CX12 C CX135 C:C CX149 T JL219 T:T
CX123 C CX136 C:C CX161 T JL236 T:T
CX124 C CX138 C:C CX162 T JL242 T:T
CX130 C CX140 C:C CX163 T JL243 T:T
CX131 C CX141 C:C CX17 T JL246 T:T
CX132 C CX142 C:C CX171 T JL247 T:T
CX135 C CX144 C:C CX173 T JL249 T:T
CX136 C CX146 C:C CX181 T JL259 T:T
CX138 C CX147 C:C CX183 T JL264 T:T
CX140 C CX150 C:C CX184 T JL267 T:T
CX141 C CX151 C:C CX186 T JL268 T:T
CX142 C CX152 C:C CX187 T JL269 T:T
CX144 C CX153 C:C CX192 T JL270 T:T
CX146 C CX154 C:C CX193 T JL278 T:T
CX147 C CX155 C:C CX20 T JL279 T:T
CX150 C CX158 C:C CX202 T JL282 T:T
CX151 C CX159 C:C CX206 T JL300 T:T
CX152 C CX160 C:C CX207 T JL305 T:T
CX153 C CX164 C:C CX209 T JL315 T:T
CX154 C CX168 C:C CX210 T JL328 T:T
CX155 C CX169 C:C CX211 T JL334 T:T
CX158 C CX172 C:C CX217 T JL336 T:T
CX159 C CX175 C:C CX220 T JL340 T:T
CX160 C CX178 C:C CX221 T JL348 T:T
CX164 C CX179 C:C CX222 T C15 T:T
CX168 C CX18 C:C CX225 T C7 T:T
CX169 C CX180 C:C CX228 T C9 T:T
CX170 C CX185 C:C CX242 T C22 T:T
CX172 C CX19 C:C CX243 T C25 T:T
CX175 C CX194 C:C CX250 T C26 T:T
CX178 C CX196 C:C CX251 T C32 T:T
CX179 C CX198 C:C CX253 T C36 T:T
CX18 C CX199 C:C CX256 T C1124 T:T
CX180 C CX201 C:C CX257 T CX1 T:T
CX185 C CX204 C:C CX258 T CX6 T:T
CX19 C CX215 C:C CX259 T CX13 T:T
CX194 C CX22 C:C CX264 T CX17 T:T
CX196 C CX235 C:C CX273 T CX20 T:T
CX197 C CX24 C:C CX276 T CX28 T:T
CX198 C CX246 C:C CX28 T CX49 T:T
CX199 C CX247 C:C CX283 T CX54 T:T
CX201 C CX248 C:C CX285 T CX57 T:T
CX203 C CX261 C:C CX292 T CX66 T:T
CX204 C CX268 C:C CX3 T CX76 T:T
CX205 C CX269 C:C CX304 T CX84 T:T
CX21 C CX271 C:C CX307 T CX134 T:T
CX213 C CX272 C:C CX308 T CX137 T:T
CX215 C CX275 C:C CX309 T CX143 T:T
CX218 C CX277 C:C CX310 T CX145 T:T
CX22 C CX278 C:C CX311 T CX148 T:T
CX230 C CX280 C:C CX312 T CX149 T:T
CX235 C CX282 C:C CX313 T CX148 T:T
CX24 C CX29 C:C CX323 T CX149 T:T
CX246 C CX291 C:C CX38 T CX162 T:T
CX247 C CX293 C:C CX4 T CX163 T:T
CX248 C CX294 C:C CX49 T CX181 T:T
CX249 C CX299 C:C CX54 T CX183 T:T
CX26 C CX30 C:C CX57 T CX192 T:T
CX261 C CX300 C:C CX6 T CX202 T:T
CX262 C CX314 C:C CX66 T CX209 T:T
CX268 C CX315 C:C CX74 T CX210 T:T
CX269 C CX316 C:C CX76 T CX217 T:T
CX27 C CX317 C:C CX84 T CX222 T:T
CX270 C CX319 C:C E2 T CX225 T:T
CX271 C CX32 C:C E4 T CX228 T:T
CX272 C CX320 C:C H660 T CX243 T:T
CX274 C CX321 C:C H750 T CX253 T:T
CX275 C CX322 C:C H751 T CX257 T:T
CX277 C CX324 C:C H760 T CX273 T:T
CX278 C CX326 C:C JL001 T CX308 T:T
CX280 C CX328 C:C JL002 T CX309 T:T
CX281 C CX33 C:C JL003 T CX310 T:T
CX282 C CX35 C:C JL004 T CX311 T:T
CX287 C CX36 C:C JL007 T CX312 T:T
CX29 C CX39 C:C JL008 T CX3 T:T
CX290 C CX47 C:C JL010 T CX207 T:T
CX291 C CX48 C:C JL012 T CX242 T:T
CX293 C CX50 C:C JL013 T CX4 T:T
CX294 C CX53 C:C JL015 T CX206 T:T
CX298 C CX61 C:C JL017 T CX323 T:T
CX299 C CX65 C:C JL020 T JL037 T:T
CX30 C CX68 C:C JL021 T JL038 T:T
CX300 C CX71 C:C JL027 T JL113 T:T
CX305 C CX78 C:C JL028 T JL251 T:T
CX314 C CX80 C:C JL031 T JL311 T:T
CX315 C CX83 C:C JL033 T A3 T:T
CX316 C CX90 C:C JL034 T E2 T:T
CX317 C CX93 C:C JL037 T E4 T:T
CX318 C CX94 C:C JL038 T H660 T:T
CX319 C CX96 C:C JL051 T H750 T:T
CX32 C H166 C:C JL053 T H751 T:T
CX320 C H542 C:C JL058 T H760 T:T
CX321 C H681 C:C JL064 T 　 　
CX322 C JL005 C:C JL068 T 　 　
CX324 C JL006 C:C JL079 T 　 　
CX326 C JL014 C:C JL082 T 　 　
CX327 C JL016 C:C JL083 T 　 　
CX328 C JL018 C:C JL086 T 　 　
CX33 C JL019 C:C JL088 T 　 　
CX34 C JL022 C:C JL090 T 　 　
CX35 C JL023 C:C JL092 T 　 　
CX36 C JL024 C:C JL097 T 　 　
CX39 C JL025 C:C JL100 T 　 　
CX47 C JL026 C:C JL101 T 　 　
CX48 C JL029 C:C JL104 T 　 　
CX5 C JL030 C:C JL105 T 　 　
CX50 C JL035 C:C JL113 T 　 　
CX53 C JL036 C:C JL219 T 　 　
CX61 C JL039 C:C JL236 T 　 　
CX63 C JL041 C:C JL242 T 　 　
CX64 C JL042 C:C JL243 T 　 　
CX65 C JL043 C:C JL246 T 　 　
CX68 C JL045 C:C JL247 T 　 　
CX71 C JL047 C:C JL249 T 　 　
CX78 C JL048 C:C JL251 T 　 　
CX8 C JL049 C:C JL257 T 　 　
CX80 C JL050 C:C JL258 T 　 　
CX83 C JL052 C:C JL259 T 　 　
CX90 C JL055 C:C JL263 T 　 　
CX91 C JL056 C:C JL264 T 　 　
CX92 C JL057 C:C JL267 T 　 　
CX93 C JL060 C:C JL268 T 　 　
CX94 C JL061 C:C JL269 T 　 　
CX95 C JL062 C:C JL270 T 　 　
CX96 C JL063 C:C JL276 T 　 　
H166 C JL065 C:C JL277 T 　 　
H542 C JL066 C:C JL278 T 　 　
H681 C JL067 C:C JL279 T 　 　
JL005 C JL069 C:C JL282 T 　 　
JL006 C JL070 C:C JL300 T 　 　
JL009 C JL071 C:C JL305 T 　 　
JL011 C JL072 C:C JL311 T 　 　
JL014 C JL073 C:C JL315 T 　 　
JL016 C JL075 C:C JL323 T 　 　
JL018 C JL076 C:C JL328 T 　 　
JL019 C JL080 C:C JL332 T 　 　
JL022 C JL084 C:C JL334 T 　 　
JL023 C JL085 C:C JL336 T 　 　
JL024 C JL087 C:C JL340 T 　 　
JL025 C JL089 C:C JL342 T 　 　
JL026 C JL091 C:C JL348 T 　 　
JL029 C JL095 C:C JL349 T 　 　
JL030 C JL098 C:C
JL032 C JL099 C:C
JL035 C JL102 C:C
JL036 C JL103 C:C
JL039 C JL106 C:C
JL041 C JL107 C:C
JL042 C JL208 C:C
JL043 C JL209 C:C
JL044 C JL211 C:C
JL045 C JL212 C:C
JL046 C JL213 C:C
JL047 C JL214 C:C
JL048 C JL215 C:C
JL049 C JL216 C:C
JL050 C JL217 C:C
JL052 C JL218 C:C
JL054 C JL220 C:C
JL055 C JL221 C:C
JL056 C JL222 C:C
JL057 C JL223 C:C
JL059 C JL224 C:C
JL060 C JL225 C:C
JL061 C JL226 C:C
JL062 C JL227 C:C
JL063 C JL228 C:C
JL065 C JL229 C:C
JL066 C JL230 C:C
JL067 C JL231 C:C
JL069 C JL232 C:C
JL070 C JL233 C:C
JL071 C JL234 C:C
JL072 C JL235 C:C
JL073 C JL238 C:C
JL075 C JL239 C:C
JL076 C JL240 C:C
JL080 C JL241 C:C
JL081 C JL244 C:C
JL084 C JL245 C:C
JL085 C JL252 C:C
JL087 C JL253 C:C
JL089 C JL254 C:C
JL091 C JL255 C:C
JL095 C JL256 C:C
JL096 C JL261 C:C
JL098 C JL262 C:C
JL099 C JL265 C:C
JL102 C JL271 C:C
JL103 C JL272 C:C
JL106 C JL273 C:C
JL107 C JL274 C:C
JL208 C JL280 C:C
JL209 C JL283 C:C
JL210 C JL284 C:C
JL211 C JL285 C:C
JL212 C JL286 C:C
JL213 C JL287 C:C
JL214 C JL288 C:C
JL215 C JL289 C:C
JL216 C JL290 C:C
JL217 C JL291 C:C
JL218 C JL292 C:C
JL220 C JL293 C:C
JL221 C JL294 C:C
JL222 C JL295 C:C
JL223 C JL296 C:C
JL224 C JL297 C:C
JL225 C JL298 C:C
JL226 C JL299 C:C
JL227 C JL301 C:C
JL228 C JL302 C:C
JL229 C JL303 C:C
JL230 C JL304 C:C
JL231 C JL308 C:C
JL232 C JL309 C:C
JL233 C JL310 C:C
JL234 C JL312 C:C
JL235 C JL313 C:C
JL237 C JL314 C:C
JL238 C JL316 C:C
JL239 C JL317 C:C
JL240 C JL318 C:C
JL241 C JL319 C:C
JL244 C JL320 C:C
JL245 C JL321 C:C
JL248 C JL324 C:C
JL252 C JL325 C:C
JL253 C JL327 C:C
JL254 C JL329 C:C
JL255 C JL330 C:C
JL256 C JL331 C:C
JL260 C JL335 C:C
JL261 C JL337 C:C
JL262 C JL339 C:C
JL265 C JL341 C:C
JL271 C JL343 C:C
JL272 C JL344 C:C
JL273 C JL345 C:C
JL274 C JL346 C:C
JL275 C 　 　
JL280 C 　 　
JL281 C 　 　
JL283 C 　 　
JL284 C 　 　
JL285 C 　 　
JL286 C 　 　
JL287 C 　 　
JL288 C 　 　
JL289 C 　 　
JL290 C 　 　
JL291 C 　 　
JL292 C 　 　
JL293 C 　 　
JL294 C 　 　
JL295 C 　 　
JL296 C 　 　
JL297 C 　 　
JL298 C 　 　
JL299 C 　 　
JL301 C 　 　
JL302 C 　 　
JL303 C 　 　
JL304 C 　 　
JL308 C 　 　
JL309 C 　 　
JL310 C 　 　
JL312 C 　 　
JL313 C 　 　
JL314 C 　 　
JL316 C 　 　
JL317 C 　 　
JL318 C 　 　
JL319 C 　 　
JL320 C 　 　
JL321 C 　 　
JL324 C 　 　
JL325 C 　 　
JL326 C 　 　
JL327 C 　 　
JL329 C 　 　
JL330 C 　 　
JL331 C 　 　
JL333 C 　 　
JL335 C 　 　
JL337 C 　 　
JL339 C 　 　
JL341 C 　 　
JL343 C 　 　
JL344 C 　 　
JL345 C 　 　
JL346 C 　 　
JL347 C 　 　
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